Reference sequence (1): Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 Identities normalised by aligned length. Colored by: property |
cov pid 1 [ . . . . : . 60
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% TAGCTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% TAGCTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% TAATTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% TAGCTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA
consensus/100% TAusTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA
consensus/90% TAusTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA
consensus/80% TAusTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA
consensus/70% TAGCTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA
cov pid 61 . . . 1 . . 120
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GTCGAGCGGGCCTGTCAAGGCGTTATGTTTTGGCAGGTTAAGCGGCGGACGGGTGAGTAA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GTCGAGCGGGCCTGTCAAGGCGTTATGTTTTGGCAGGTTAAGCGGCGGACGGGTGAGTAA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GTCGAGCGGGCCTGTCAAGGCCTCGTGTCTTGGCAGGTTTAGCGGCGGACGGGTGAGTAA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GTCGAGCGGGCCTGTCAAGGCGTTATGTTTTGGCAGGTTAAGCGGCGGACGGGTGAGTAA
consensus/100% GTCGAGCGGGCCTGTCAAGGCsTsuTGTsTTGGCAGGTTsAGCGGCGGACGGGTGAGTAA
consensus/90% GTCGAGCGGGCCTGTCAAGGCsTsuTGTsTTGGCAGGTTsAGCGGCGGACGGGTGAGTAA
consensus/80% GTCGAGCGGGCCTGTCAAGGCsTsuTGTsTTGGCAGGTTsAGCGGCGGACGGGTGAGTAA
consensus/70% GTCGAGCGGGCCTGTCAAGGCGTTATGTTTTGGCAGGTTAAGCGGCGGACGGGTGAGTAA
cov pid 121 . . : . . . 180
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% CGCGTGAGCAACCTACCCTTGAGACAGGGATAACCCTGGGAAACCGGGGCTAATACCTGA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% CGCGTGAGCAACCTACCCTTGAGACAGGGATAACCCTGGGAAACCGGGGCTAATACCTGA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% CGCGTGGGTAACCTGCCCTTGAGACCGGGATAACCCTGGGAAACTGGGGCTAATACCGGA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% CGCGTGAGCAACCTACCCTTGAGACAGGGATAACCCTGGGAAACCGGGGCTAATACCTGA
consensus/100% CGCGTGuGsAACCTuCCCTTGAGACsGGGATAACCCTGGGAAACsGGGGCTAATACCsGA
consensus/90% CGCGTGuGsAACCTuCCCTTGAGACsGGGATAACCCTGGGAAACsGGGGCTAATACCsGA
consensus/80% CGCGTGuGsAACCTuCCCTTGAGACsGGGATAACCCTGGGAAACsGGGGCTAATACCsGA
consensus/70% CGCGTGAGCAACCTACCCTTGAGACAGGGATAACCCTGGGAAACCGGGGCTAATACCTGA
cov pid 181 . 2 . . . . 240
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% TATACTCTATTAGGGCATCCT------GATGGAGGAAAGGGCGGGAAGCCGCTCAAGGAT
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% TATACTCTATTAGGGCATCCT------GATGGAGGAAAGGGCGGGAAGCCGCTCAAGGAT
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% TACGCTCCCTCTAGGGCATCCTGGAGGGAGGAAAGGTAGCGCAAGCTGCCGCTCAAGGAT
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% TATACTCTATTAGGGCATCCT------GATGGAGGAAAGGGCGGGAAGCCGCTCAAGGAT
consensus/100% TAsuCTCssTssuGGssssCs......GAsGuAuGusAGsGCuuGssGCCGCTCAAGGAT
consensus/90% TAsuCTCssTssuGGssssCs......GAsGuAuGusAGsGCuuGssGCCGCTCAAGGAT
consensus/80% TAsuCTCssTssuGGssssCs......GAsGuAuGusAGsGCuuGssGCCGCTCAAGGAT
consensus/70% TATACTCTATTAGGGCATCCT......GATGGAGGAAAGGGCGGGAAGCCGCTCAAGGAT
cov pid 241 : . . . . 3 300
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GGGCTCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCTACGACGGGTAG
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GGGCTCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCTACGACGGGTAG
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GGGCCCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCGACGACGGGTAG
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GGGCTCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCTACGACGGGTAG
consensus/100% GGGCsCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCsACGACGGGTAG
consensus/90% GGGCsCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCsACGACGGGTAG
consensus/80% GGGCsCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCsACGACGGGTAG
consensus/70% GGGCTCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCTACGACGGGTAG
cov pid 301 . . . . : . 360
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA
consensus/100% CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA
consensus/90% CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA
consensus/80% CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA
consensus/70% CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA
cov pid 361 . . . 4 . . 420
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGTGAGC
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGTGAGC
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GGCAGCAGTGGGGAATCTTGGGCAATGGGCGAAAGCCTGACCCAGCGACGCCGCGTGGGG
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGTGAGC
consensus/100% GGCAGCAGTGGGGAATCTTssGCAATGGGCGAAAGCCTGACssAGCGACGCCGCGTGuGs
consensus/90% GGCAGCAGTGGGGAATCTTssGCAATGGGCGAAAGCCTGACssAGCGACGCCGCGTGuGs
consensus/80% GGCAGCAGTGGGGAATCTTssGCAATGGGCGAAAGCCTGACssAGCGACGCCGCGTGuGs
consensus/70% GGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGTGAGC
cov pid 421 . . : . . . 480
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GAAGAAGGCCTTCGGGTCGTAAAGCTCGATAGTGTGGGAAGAAGGGATG-----------
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GAATAAGGCCTTCGGGTCGTAAAGCTCGATAGTGTGGGAAGAAGGGATG-----------
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GATGAAGGCCTGCGGGTCGTAAACCCCTGTCGGAAGGGACGATGCTCTAAGGGGTGAACA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GAAGAAGGCCTTCGGGTCGTAAAGCTCGATAGTGTGGGAAGAAGGGATG-----------
consensus/100% GAssAAGGCCTsCGGGTCGTAAAsCsCsuTsGsusGGGAsGAsGsssTu...........
consensus/90% GAssAAGGCCTsCGGGTCGTAAAsCsCsuTsGsusGGGAsGAsGsssTu...........
consensus/80% GAssAAGGCCTsCGGGTCGTAAAsCsCsuTsGsusGGGAsGAsGsssTu...........
consensus/70% GAAGAAGGCCTTCGGGTCGTAAAGCTCGATAGTGTGGGAAGAAGGGATG...........
cov pid 481 . 5 . . . . 540
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% ---------------ACGGTACCACACGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% ---------------ACGGTACCACACGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GCCTCTTAGAGTGACGGTACCTTCCAAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% ---------------ACGGTACCACACGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC
consensus/100% ...............ussusssssCAsGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC
consensus/90% ...............ussusssssCAsGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC
consensus/80% ...............ussusssssCAsGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC
consensus/70% ...............ACGGTACCACACGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC
cov pid 541 : . . . . 6 600
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTTACTGGGCGTAAAGGGCGCGTAGGCGG
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTTACTGGGCGTAAAGGGCGCGTAGGCGG
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTCACTGGGCGTAAAGGGCGCGTAGGCGG
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTTACTGGGCGTAAAGGGCGCGTAGGCGG
consensus/100% GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTsACTGGGCGTAAAGGGCGCGTAGGCGG
consensus/90% GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTsACTGGGCGTAAAGGGCGCGTAGGCGG
consensus/80% GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTsACTGGGCGTAAAGGGCGCGTAGGCGG
consensus/70% GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTTACTGGGCGTAAAGGGCGCGTAGGCGG
cov pid 601 . . . . : . 660
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% TTTAGCAAGTCAGGTGTAAAAGGCCACGGCTCAACCGTGGATATGCATCTGAAACTGCTG
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% TTTAGCAAGTCAGGTGTAAAAGGCCACGGCTCAACCGTGGATATGCATCTGAAACTGCTG
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% TCTAGCAAGTCAGGTGTAAAAGACCACGGCTCAACCGTGGAGGTGCACCTGAAACTGCTA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% TTTAGCAAGTCAGGTGTAAAAGGCCACGGCTCAACCGTGGATATGCATCTGAAACTGCTG
consensus/100% TsTAGCAAGTCAGGTGTAAAAGuCCACGGCTCAACCGTGGAsuTGCAsCTGAAACTGCTu
consensus/90% TsTAGCAAGTCAGGTGTAAAAGuCCACGGCTCAACCGTGGAsuTGCAsCTGAAACTGCTu
consensus/80% TsTAGCAAGTCAGGTGTAAAAGuCCACGGCTCAACCGTGGAsuTGCAsCTGAAACTGCTu
consensus/70% TTTAGCAAGTCAGGTGTAAAAGGCCACGGCTCAACCGTGGATATGCATCTGAAACTGCTG
cov pid 661 . . . 7 . . 720
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% AGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% AGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% AGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC
consensus/100% uGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC
consensus/90% uGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC
consensus/80% uGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC
consensus/70% AGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC
cov pid 721 . . : . . . 780
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GGGAGGAATACCAGTGGCGAAGGCGACTCCCTGGACTGGCCCTGACGCTGAGGCGCGAGA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GGGAGGAATACCAGTGGCGAAGGCGACTCCCTGGACTGGCCCTGACGCTGAGGCGCGAGA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GGGAGGAATACCAGTGGCGAAAGCGACTCCCTGGACTGACCCTGACGCTGAGGCGCGAAA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GGGAGGAATACCAGTGGCGAAGGCGACTCCCTGGACTGGCCCTGACGCTGAGGCGCGAGA
consensus/100% GGGAGGAATACCAGTGGCGAAuGCGACTCCCTGGACTGuCCCTGACGCTGAGGCGCGAuA
consensus/90% GGGAGGAATACCAGTGGCGAAuGCGACTCCCTGGACTGuCCCTGACGCTGAGGCGCGAuA
consensus/80% GGGAGGAATACCAGTGGCGAAuGCGACTCCCTGGACTGuCCCTGACGCTGAGGCGCGAuA
consensus/70% GGGAGGAATACCAGTGGCGAAGGCGACTCCCTGGACTGGCCCTGACGCTGAGGCGCGAGA
cov pid 781 . 8 . . . . 840
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA
consensus/100% GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA
consensus/90% GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA
consensus/80% GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA
consensus/70% GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA
cov pid 841 : . . . . 9 900
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GGTGTGGGGAGCGGAAGCTTTCCGTGCCGTAGGAAACCCAATAAGCACCCCGCCTGGGGA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GGTGTGGGGAGCGGAAGCTTTCCGTGCCGTAGGAAACCCAATAAGCACCCCGCCTGGGGA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GGTGTGGGGAGCGGAAGCTTCCCGTGCCGTAGGTAACCCATTAAGCACCCCGCCTGGGGA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GGTGTGGGGAGCGGAAGCTTTCCGTGCCGTAGGAAACCCAATAAGCACCCCGCCTGGGGA
consensus/100% GGTGTGGGGAGCGGAAGCTTsCCGTGCCGTAGGsAACCCAsTAAGCACCCCGCCTGGGGA
consensus/90% GGTGTGGGGAGCGGAAGCTTsCCGTGCCGTAGGsAACCCAsTAAGCACCCCGCCTGGGGA
consensus/80% GGTGTGGGGAGCGGAAGCTTsCCGTGCCGTAGGsAACCCAsTAAGCACCCCGCCTGGGGA
consensus/70% GGTGTGGGGAGCGGAAGCTTTCCGTGCCGTAGGAAACCCAATAAGCACCCCGCCTGGGGA
cov pid 901 . . . . : . 960
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA
consensus/100% GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA
consensus/90% GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA
consensus/80% GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA
consensus/70% GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA
cov pid 961 . . . 0 . . 1020
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTAGTAGC
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTGGTAGC
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% TGTGGTTTAATTCGATGCTAAGCGAAGAACCTTACCAGGGCTTGACATGCAGGTGGTAGC
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTAGTAGC
consensus/100% TGTGGTTTAATTCGAsGCsAsGCGAAGAACCTTACCAGGGCTTGACATGCAGGTuGTAGC
consensus/90% TGTGGTTTAATTCGAsGCsAsGCGAAGAACCTTACCAGGGCTTGACATGCAGGTuGTAGC
consensus/80% TGTGGTTTAATTCGAsGCsAsGCGAAGAACCTTACCAGGGCTTGACATGCAGGTuGTAGC
consensus/70% TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTuGTAGC
cov pid 1021 . . : . . . 1080
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GAGCCGAAAGGTGAGCGACCCTTTC-TTATGGGAGGGAGCCTGCACAGGTGGTGCATGGT
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GACCCGAAAGGGAAGCGACCCTACCGGTAAGGTAGGGAGCCTGCACAGGTGGTGCATGGT
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GACCCGAAAGGGAAGCGACCCTACCGGTAAGGTAGGGAGCCTGCACAGGTGGTGCATGGT
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GAGCCGAAAGGTGAGCGACCCTTTC-TTATGGGAGGGAGCCTGCACAGGTGGTGCATGGT
consensus/100% GAsCCGAAAGGsuAGCGACCCTssC.sTAsGGsAGGGAGCCTGCACAGGTGGTGCATGGT
consensus/90% GAsCCGAAAGGsuAGCGACCCTssC.sTAsGGsAGGGAGCCTGCACAGGTGGTGCATGGT
consensus/80% GAsCCGAAAGGsuAGCGACCCTssC.sTAsGGsAGGGAGCCTGCACAGGTGGTGCATGGT
consensus/70% GAsCCGAAAGGsuAGCGACCCTssC.sTAsGGsAGGGAGCCTGCACAGGTGGTGCATGGT
cov pid 1081 . 1 . . . . 1140
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC
consensus/100% TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC
consensus/90% TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC
consensus/80% TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC
consensus/70% TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC
cov pid 1141 : . . . . 2 1200
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% TCTAGTTGCCATCGGGTAAAGCCGGGCACTCTAGAGGGACTGCCGTCGACAAGACGGAGG
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% TCTAGTTGCCAGCGGGTGATGCCGGGCACTCTAGAGGGACTGCCGTCGATAAGACGGAGG
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% TCTAGTTGCCAGCGGGTGATGCCGGGCACTCTAGAGGGACTGCCGTCGATAAGACGGAGG
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% TCTAGTTGCCATCGGGTAAAGCCGGGCACTCTAGAGGGACTGCCGTCGACAAGACGGAGG
consensus/100% TCTAGTTGCCAsCGGGTuAsGCCGGGCACTCTAGAGGGACTGCCGTCGAsAAGACGGAGG
consensus/90% TCTAGTTGCCAsCGGGTuAsGCCGGGCACTCTAGAGGGACTGCCGTCGAsAAGACGGAGG
consensus/80% TCTAGTTGCCAsCGGGTuAsGCCGGGCACTCTAGAGGGACTGCCGTCGAsAAGACGGAGG
consensus/70% TCTAGTTGCCAsCGGGTuAsGCCGGGCACTCTAGAGGGACTGCCGTCGAsAAGACGGAGG
cov pid 1201 . . . . : . 1260
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA
consensus/100% AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA
consensus/90% AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA
consensus/80% AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA
consensus/70% AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA
cov pid 1261 . . . 3 . . 1320
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% ATGGCCGGTACAGAGGGAAGCGAAGGAGCGATCCGGAGCGAATCCCAAAAAGCCGGTCTC
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% ATGGCCGGTACAGAGGGAAGCGAAGGAGTGATCTGGAGCGAATCCCAAAAAGCCGGTCTC
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% ATGGCCGGTACAGCGGGATGCGAAGCCGCGAGGTGGAGCGAATCCCTGAAAGCCGGTCTC
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% ATGGCCGGTACAGAGGGAAGCGAAGGAGTGATCTGGAGCGAATCCCAAAAAGCCGGTCTC
consensus/100% ATGGCCGGTACAGsGGGAsGCGAAGssGsGAsssGGAGCGAATCCCsuAAAGCCGGTCTC
consensus/90% ATGGCCGGTACAGsGGGAsGCGAAGssGsGAsssGGAGCGAATCCCsuAAAGCCGGTCTC
consensus/80% ATGGCCGGTACAGsGGGAsGCGAAGssGsGAsssGGAGCGAATCCCsuAAAGCCGGTCTC
consensus/70% ATGGCCGGTACAGAGGGAAGCGAAGGAGsGATCTGGAGCGAATCCCAAAAAGCCGGTCTC
cov pid 1321 . . : . . . 1380
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT
consensus/100% AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT
consensus/90% AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT
consensus/80% AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT
consensus/70% AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT
cov pid 1381 . 4 . . . . 1440
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% CAGCATGCCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGA
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% CAGCATGCCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGA
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% CAGCATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGGGA
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% CAGCATGCCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGA
consensus/100% CAGCATGCCGCGGTGAATuCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGuGA
consensus/90% CAGCATGCCGCGGTGAATuCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGuGA
consensus/80% CAGCATGCCGCGGTGAATuCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGuGA
consensus/70% CAGCATGCCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGA
cov pid 1441 : . . . . 5 1500
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GTCTGCAACACCCGAAGCCGGTGGCCCAACCCGAAGAG----------------------
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GTCTGCAACACCCGAAGCCGGTGGCCCAACCCGAAGAG----------------------
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GCCGGCAACACCCGAAGCCGGACCTCCCAACCCGGCACTCAAGTGGGCATGTTAGAAAAG
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GTCTGCAACACCCGAAGCCGGTGGCCCAACCCGAAGAG----------------------
consensus/100% GsCsGCAACACCCGAAGCCGGssssCCsAsCCsuusAs......................
consensus/90% GsCsGCAACACCCGAAGCCGGssssCCsAsCCsuusAs......................
consensus/80% GsCsGCAACACCCGAAGCCGGssssCCsAsCCsuusAs......................
consensus/70% GTCTGCAACACCCGAAGCCGGTGGCCCAACCCGAAGAG......................
cov pid 1501 . . . . : . 1560
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% --------------------------------------GGAGGGAGCCGTCGAAGGTGGG
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% --------------------------------------GGAGGGAGCCGTCGAAGGTGGG
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GTAGGAAGAGGAAGAATGATGTGCCCACTTGAGTGCCGGGAGGGAGCCGTCGAAGGTGGG
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% --------------------------------------GGAGGGAGCCGTCGAAGGTGGG
consensus/100% ......................................GGAGGGAGCCGTCGAAGGTGGG
consensus/90% ......................................GGAGGGAGCCGTCGAAGGTGGG
consensus/80% ......................................GGAGGGAGCCGTCGAAGGTGGG
consensus/70% ......................................GGAGGGAGCCGTCGAAGGTGGG
cov pid 1561 . . . 6 . . 1620
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% GCAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% GCAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% GCTGGTGACTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% GCAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC
consensus/100% GCsGuTGAsTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC
consensus/90% GCsGuTGAsTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC
consensus/80% GCsGuTGAsTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC
consensus/70% GCAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC
cov pid 1621 ] 1627
1 Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 100.0% 100.0% CTCCTTT
2 Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 100.0% 98.9% CTCCTTT
3 Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 100.0% 86.5% CTCCTTT
4 Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 100.0% 99.9% CTCCTTT
consensus/100% CTCCTTT
consensus/90% CTCCTTT
consensus/80% CTCCTTT
consensus/70% CTCCTTT
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