CLUSTAL O(1.2.4) multiple sequence alignment Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 TAGCTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 TAGCTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 TAATTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 TAGCTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAA ** ******************************************************** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GTCGAGCGGGCCTGTCAAGGCGTTATGTTTTGGCAGGTTAAGCGGCGGACGGGTGAGTAA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GTCGAGCGGGCCTGTCAAGGCGTTATGTTTTGGCAGGTTAAGCGGCGGACGGGTGAGTAA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GTCGAGCGGGCCTGTCAAGGCCTCGTGTCTTGGCAGGTTTAGCGGCGGACGGGTGAGTAA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GTCGAGCGGGCCTGTCAAGGCGTTATGTTTTGGCAGGTTAAGCGGCGGACGGGTGAGTAA ********************* * *** ********** ******************** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 CGCGTGAGCAACCTACCCTTGAGACAGGGATAACCCTGGGAAACCGGGGCTAATACCTGA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 CGCGTGAGCAACCTACCCTTGAGACAGGGATAACCCTGGGAAACCGGGGCTAATACCTGA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 CGCGTGGGTAACCTGCCCTTGAGACCGGGATAACCCTGGGAAACTGGGGCTAATACCGGA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 CGCGTGAGCAACCTACCCTTGAGACAGGGATAACCCTGGGAAACCGGGGCTAATACCTGA ****** * ***** ********** ****************** ************ ** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 TATACTCTATTAGGGCATCCT------GATGGAGGAAAGGGCGGGAAGCCGCTCAAGGAT Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 TATACTCTATTAGGGCATCCT------GATGGAGGAAAGGGCGGGAAGCCGCTCAAGGAT Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 TACGCTCCCTCTAGGGCATCCTGGAGGGAGGAAAGGTAGCGCAAGCTGCCGCTCAAGGAT Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 TATACTCTATTAGGGCATCCT------GATGGAGGAAAGGGCGGGAAGCCGCTCAAGGAT ** *** * ** * ** * * * ** ** * ************* Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GGGCTCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCTACGACGGGTAG Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GGGCTCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCTACGACGGGTAG Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GGGCCCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCGACGACGGGTAG Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GGGCTCGCGTCCCATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCTACGACGGGTAG **** ******************************************* *********** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 CCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA ************************************************************ Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGTGAGC Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGTGAGC Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GGCAGCAGTGGGGAATCTTGGGCAATGGGCGAAAGCCTGACCCAGCGACGCCGCGTGGGG Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGTGAGC ******************* ******************** ************** * Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GAAGAAGGCCTTCGGGTCGTAAAGCTCGATAGTGTGGGAAGAAGGGATG----------- Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GAATAAGGCCTTCGGGTCGTAAAGCTCGATAGTGTGGGAAGAAGGGATG----------- Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GATGAAGGCCTGCGGGTCGTAAACCCCTGTCGGAAGGGACGATGCTCTAAGGGGTGAACA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GAAGAAGGCCTTCGGGTCGTAAAGCTCGATAGTGTGGGAAGAAGGGATG----------- ** ******* *********** * * * * **** ** * * Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 ---------------ACGGTACCACACGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 ---------------ACGGTACCACACGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GCCTCTTAGAGTGACGGTACCTTCCAAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 ---------------ACGGTACCACACGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGC ** ********************************* Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTTACTGGGCGTAAAGGGCGCGTAGGCGG Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTTACTGGGCGTAAAGGGCGCGTAGGCGG Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTCACTGGGCGTAAAGGGCGCGTAGGCGG Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GGTAAGACGTAGGGGGCGAGCGTTGTCCGGAGTTACTGGGCGTAAAGGGCGCGTAGGCGG ********************************* ************************** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 TTTAGCAAGTCAGGTGTAAAAGGCCACGGCTCAACCGTGGATATGCATCTGAAACTGCTG Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 TTTAGCAAGTCAGGTGTAAAAGGCCACGGCTCAACCGTGGATATGCATCTGAAACTGCTG Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 TCTAGCAAGTCAGGTGTAAAAGACCACGGCTCAACCGTGGAGGTGCACCTGAAACTGCTA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 TTTAGCAAGTCAGGTGTAAAAGGCCACGGCTCAACCGTGGATATGCATCTGAAACTGCTG * ******************** ****************** **** *********** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 AGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 AGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 AGCTAGAGGGCAGGAGAGGGGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATC *********************************************************** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GGGAGGAATACCAGTGGCGAAGGCGACTCCCTGGACTGGCCCTGACGCTGAGGCGCGAGA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GGGAGGAATACCAGTGGCGAAGGCGACTCCCTGGACTGGCCCTGACGCTGAGGCGCGAGA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GGGAGGAATACCAGTGGCGAAAGCGACTCCCTGGACTGACCCTGACGCTGAGGCGCGAAA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GGGAGGAATACCAGTGGCGAAGGCGACTCCCTGGACTGGCCCTGACGCTGAGGCGCGAGA ********************* **************** ******************* * Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGGTGCTA ************************************************************ Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GGTGTGGGGAGCGGAAGCTTTCCGTGCCGTAGGAAACCCAATAAGCACCCCGCCTGGGGA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GGTGTGGGGAGCGGAAGCTTTCCGTGCCGTAGGAAACCCAATAAGCACCCCGCCTGGGGA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GGTGTGGGGAGCGGAAGCTTCCCGTGCCGTAGGTAACCCATTAAGCACCCCGCCTGGGGA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GGTGTGGGGAGCGGAAGCTTTCCGTGCCGTAGGAAACCCAATAAGCACCCCGCCTGGGGA ******************** ************ ****** ******************* Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA ************************************************************ Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTAGTAGC Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTGGTAGC Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 TGTGGTTTAATTCGATGCTAAGCGAAGAACCTTACCAGGGCTTGACATGCAGGTGGTAGC Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTAGTAGC *************** ** * ********************************* ***** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GAGCCGAAAGGTGAGCGACCCTTTC-TTATGGGAGGGAGCCTGCACAGGTGGTGCATGGT Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GACCCGAAAGGGAAGCGACCCTACCGGTAAGGTAGGGAGCCTGCACAGGTGGTGCATGGT Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GACCCGAAAGGGAAGCGACCCTACCGGTAAGGTAGGGAGCCTGCACAGGTGGTGCATGGT Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GAGCCGAAAGGTGAGCGACCCTTTC-TTATGGGAGGGAGCCTGCACAGGTGGTGCATGGT ** ******** ********* * ** ** *************************** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCC ************************************************************ Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 TCTAGTTGCCATCGGGTAAAGCCGGGCACTCTAGAGGGACTGCCGTCGACAAGACGGAGG Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 TCTAGTTGCCAGCGGGTGATGCCGGGCACTCTAGAGGGACTGCCGTCGATAAGACGGAGG Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 TCTAGTTGCCAGCGGGTGATGCCGGGCACTCTAGAGGGACTGCCGTCGATAAGACGGAGG Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 TCTAGTTGCCATCGGGTAAAGCCGGGCACTCTAGAGGGACTGCCGTCGACAAGACGGAGG *********** ***** * ***************************** ********** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 AAGGTGGGGATGACGTCAAATCATCATGCCCTATATGCCCTGGGCCACACACGTGCTACA ************************************************************ Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 ATGGCCGGTACAGAGGGAAGCGAAGGAGCGATCCGGAGCGAATCCCAAAAAGCCGGTCTC Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 ATGGCCGGTACAGAGGGAAGCGAAGGAGTGATCTGGAGCGAATCCCAAAAAGCCGGTCTC Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 ATGGCCGGTACAGCGGGATGCGAAGCCGCGAGGTGGAGCGAATCCCTGAAAGCCGGTCTC Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 ATGGCCGGTACAGAGGGAAGCGAAGGAGTGATCTGGAGCGAATCCCAAAAAGCCGGTCTC ************* **** ****** * ** ************ ************ Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGCGGAATCGCTAGTAATCGCGGAT ************************************************************ Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 CAGCATGCCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGA Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 CAGCATGCCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGA Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 CAGCATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGGGA Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 CAGCATGCCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGA ****************** ************************************** ** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GTCTGCAACACCCGAAGCCGGTGGCCCAACCCGAAGAG---------------------- Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GTCTGCAACACCCGAAGCCGGTGGCCCAACCCGAAGAG---------------------- Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GCCGGCAACACCCGAAGCCGGACCTCCCAACCCGGCACTCAAGTGGGCATGTTAGAAAAG Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GTCTGCAACACCCGAAGCCGGTGGCCCAACCCGAAGAG---------------------- * * ***************** ** * ** * Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 --------------------------------------GGAGGGAGCCGTCGAAGGTGGG Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 --------------------------------------GGAGGGAGCCGTCGAAGGTGGG Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GTAGGAAGAGGAAGAATGATGTGCCCACTTGAGTGCCGGGAGGGAGCCGTCGAAGGTGGG Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 --------------------------------------GGAGGGAGCCGTCGAAGGTGGG ********************** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 GCAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 GCAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 GCTGGTGACTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 GCAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATCAC ** * *** *************************************************** Caldanaerobacter_subterraneus_MB4_rna_07__TTE_RS00245 CTCCTTT Caldanaerobacter_subterraneus_MB4_rna_12__TTE_RS00390 CTCCTTT Caldanaerobacter_subterraneus_MB4_rna_38__TTE_RS07280 CTCCTTT Caldanaerobacter_subterraneus_MB4_rna_67__TTE_RS10765 CTCCTTT *******